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  1. Luo DX, Bernard D.G, Balk J1, Huang H, Cui XF*,1. (2012) The DUF59 family gene AE7 acts in the cytosolic iron-sulfur cluster assembly pathway to maintain nuclear genome integrity in Arabidopsis. Plant Cell. 24(10):4135-148. (1Contributed equally)

  2. Zhang XW, Jia LJ, Zhang Y, Jiang G, Li X, Zhang D, and, Tang WH*. (2012) In planta stage-specific fungal gene profiling elucidates the molecular strategies of Fusarium graminearum growing inside wheat coleoptiles. Plant Cell. 24(12):5159-176.

  3. Wang S, Wang J, Sun Y, Song Q, Li S*. (2012) PKC-mediated USP phosphorylation at Ser35 modulates 20-hydroxyecdysone signaling in Drosophila. J Proteome Res. 11(12):6187-196.

  4. Liu XL**, Yu HD**, Guan Y, Li JK, Guo FQ*. (2012) Carbonylation and Loss-of-Function Analyses of SBPase Reveal Its Metabolic Interface Role in Oxidative Stress, Carbon Assimilation, and Multiple Aspects of Growth and Development in Arabidopsis. Mol Plant. 5(5):1082-1099. (**, equal contribution)

  5. Huang X**, Kurata N**, Wei X**, Wang ZX**, Wang A, Zhao Q, Zhao Y, Liu K, Lu H, Li W, Guo Y, Lu Y, Zhou C, Fan D, Weng Q, Zhu C, Huang T, Zhang L, Wang Y, Feng L, Furuumi H, Kubo T, Miyabayashi T, Yuan X, Xu Q, Dong G, Zhan Q, Li C, Fujiyama A, Toyoda A, Lu T, Feng Q, Qian Q, Li J, Han B*. (2012) A map of rice genome variation reveals the origin of cultivated rice. Nature. 490(7421):497-501. (**, equal contribution)

  6. He CS, Chen XF, Huang H, Xu L*. (2012) Reprogramming of H3K27me3 Is Critical for Acquisition of Pluripotency from Cultured Arabidopsis Tissues. PLoS Genet. 8(8):e1002911.

  7. Yu S, Vinicius C. Galv?o, Zhang YC, Daniel Horrer, Zhang TQ, Hao YH, Feng YQ, Wang S, Schmid Markus, Wang JW*. (2012) Gibberellin Regulates the Arabidopsis Floral Transition through miR156-Targeted SQUAMOSA PROMOTER BINDING–LIKE Transcription Factors. Plant Cell. 24(8):3320-332.

  8. Li Y, Pi LM, Huang H, Xu L*. (2012) ATH1 and KNAT2 proteins act together in regulation of plant inflorescence architecture. J Exp Bot. 63 (3):1423-433.

  9. Li G **, Zhang JW **, Li JQ, Yang ZN, Huang H, Xu L*. (2012) Imitation Switch chromatin remodeling factors and their interacting RINGLET proteins act together in controlling the plant vegetative phase in Arabidopsis. Plant J. 72(2):261-270. (**, equal contribution)

  10. Yupu Diao, Anrui Lu, Bing Yang, Wenli Hu, Qing Peng, Qing-Zhi Ling, Brenda T. Beerntsen, Kenneth S?derh?ll, Erjun Ling*. (2012) Existence of Prophenoloxidase in Wing Discs: A Source of Plasma Prophenoloxidase in the Silkworm, Bombyx mori. PLoS ONE. 7(7):e41416.

  11. Xiao, H., Z. Li, Y. Jiang, Y. Yang, W. Jiang, Y. Gu, S. Yang. (2012) Metabolic engineering of d-xylose pathway in Clostridium beijerinckii to optimize solvent production from xylose mother liquid. Metab Eng. 14(5):569-578.

  12. Ren, C., Y. Gu, Y. Wu, W. Zhang, C. Yang, S. Yang, W. Jiang. (2012) Pleiotropic functions of catabolite control protein CcpA in Butanol-producing Clostridium acetobutylicum. BMC Genomics. 13:349.

  13. Lin L, Zhong SH, Cui XF, Li JM, He ZH*. (2012) Characterization of temperature sensitive mutants reveals a role for receptor-like kinase SCRAMBLED/STRUBBELIG in coordinating cell proliferation and differentiation during Arabidopsis leaf development. Plant J. 72(5):707-720.

  14. Zhang Y, Xu YH, Yi HY, Gong JM*. (2012) Vacuolar membrane transporters OsVIT1 and OsVIT2 modulate iron translocation between flag leaves and seeds in rice. Plant J. 72(3):400-410.

  15. Xiang JJ*, Zhang GH*, Qian Q**, and Xue HW**. (2012) SRL1 encodes a putative GPI-anchored protein and modulates rice leaf rolling by regulating the formation of bulliform cells. Plant Physiol. 159(4):1488-500.

  16. Chen CZ, Lv XF, Li JY, Yi HY, Gong JM*. (2012) Arabidopsis NRT1.5 is another essential component in regulation of nitrate reallocation and stress tolerance. Plant Physiol. 159(4):1582-590.

  17. Yu Z, Zhu H, Dang F, Zhang W, Qin Z, Yang S, Tan H, Lu Y*, Jiang W*. (2012) Differential regulation of antibiotic biosynthesis by DraR-K, a novel two-component system in Streptomyces coelicolor. Mol Microbiol. 85(3):535-556.

  18. Hong GJ, Xue XY, Mao YB, Wang LJ, Chen XY*. (2012) Arabidopsis MYC2 interacts with DELLA proteins in regulating sesquiterpene synthase gene expression. Plant Cell. 24(6):2635-648.

  19. Shao W#, Zhao QY#, Wang XY, Xu XY, Tang Q, Li M, Li X*, Xu YZ*. (2012) Alternative splicing and trans-splicing events revealed by analysis of the Bombyx mori transcriptome. RNA. 18(7):1395-407.

  20. Wang Y*, Chu YJ*, Xue HW**. (2012) Inositol polyphosphate 5-phosphatase-controlled Ins(1,4,5)P3/Ca2+ is crucial for maintaining pollen dormancy and regulating early germination of pollen. Development 139,2221-233 (*, equal contribution)

  21. Gou JY, Miller LM, Hou G, Yu XH, Chen XYLiu CJ*. (2012) Acetylesterase-Mediated Deacetylation of Pectin Impairs Cell Elongation, Pollen Germination, and Plant Reproduction. Plant Cell. 24:50-65.

  22. Xue XY, Mao YB, Tao XY, Huang YP, Chen XY*. (2012) New Approaches to Agricultural Insect Pest Control Based on RNA Interference. Advances in Insect Physiology. 42:73-117.

  23. Tao XY, Xue XY, Huang YP, Chen XY and Mao YB*. (2012) Gossypol-enhanced P450 gene pool contributes to cotton bollworm tolerance to a pyrethroid insecticide. Mol Ecol. 21(17):4371-385.

  24. Yang DL, Yao J, Mei CS, Tong XH, Zeng LJ, Li Q, Xiao LT, Sun TP, Li J, Deng XW, Lee CM, Thomashow MF, Yang Y*, He Z*, He SY*. (2012) Plant hormone jasmonate prioritizes defense over growth by interfering with gibberellin signaling cascade. Proc Natl Acad Sci U S A. 109(19):E1192-200.

  25. Yu HD, Yang XF, Chen ST, Wang YT, Li JK, Qi S, Liu XL, Guo FQ*. (2012) Downregulation of Chloroplast RPS1 Negatively Modulates Nuclear Heat-Responsive Expression of HsfA2 and Its Target Genes in Arabidopsis. PLoS Genet. 8(5):e1002669.

  26. Shao QM, Yang B, Xu QY, Li XQ, Lu ZQ, Wang CS, Huang YP, Kenneth Soderhall, Ling EJ*. (2012) Hindgut Innate Immunity and Regulation of Fecal Microbiota through Melanization in Insects. J Biol Chem. 287: 14270-279.

  27. Huang J, Zhang Y, Peng JS, Zhong C, Yi HY, Ow DW, Gong JM*. (2012) Fission yeast HMT1 lowers seed cadmium through phytochelatin-dependent vacuolar sequestration in Arabidopsis. Plant Physiology. 158(4):1779-788.

  28. Mei Y*, Gao HB*, Yuan M, Xue HW**. (2012) The Arabidopsis ARCP Protein, CSI1, Which Is Required for Microtubule Stability, Is Necessary for Root and Anther Development. Plant Cell. 24(3):1066-1080. (*, equal contribution)

  29. Yin LL, Xue HW*. (2012) The MADS29 Transcription Factor Regulates the Degradation of the Nucellus and the Nucellar Projection during Rice Seed Development. Plant Cell. 24(3):1049-1065.

  30. An D, Yang J, Zhang P*. (2012) Transcriptome profiling of low temperature-treated cassava apical shoots showed dynamic responses of tropical plant to cold stress. BMC Genomics. 13:64.

  31. Gao LL, Xue HW*. (2012) Global analysis of expression profiles of rice receptor-like kinase genes. Mol Plant. 5(1):143-153.

  32. Wang B, Kang QJ, Lu YZ, Bai LQ, Wang CS*. (2012) Unveiling the biosynthetic puzzle of destruxins in Metarhizium species. Proc Natl Acad Sci U S A. 109(4):1287-292.

  33. Mei Y, Jia WJ, Chu YJ, Xue HW*. (2012) Arabidopsis PIPK2 is involved in root gravitropism through regulating auxin polar transport by affecting the cycling of PIN proteins. Cell Res. 22:581-597.

  34. Xu DY, Huang WH, Li Y, Wang H, Huang H, Cui XF*. (2012) Elongator complex is critical for cell cycle progression and leaf patterning in Arabidopsis. Plant J. 69(5):792-808.

  35. Yu X, Wang H , Lu YZ, de Ruiter M, Cariaso M, Prins M, van Tunen A, He YK*. (2012) Identification of conserved and novel miRNAs that are responsive to heat stress in Brassica rapa. J Exp Bot. 63(2):1025-1038.

  36. Tao YZ, Liu D, Yan X, Zhou ZH, Jeong KL, and Yang C*. (2012) Network identification and flux quantification of glucose metabolism in Rhodobacter sphaeroides under photoheterotrophic H2-producing conditions. J Bacteriol. 194(2):274-283.

  37. Liu Q, Shi LL, Fang YD*. (2012) Dicing Bodies. Plant Physiol. 158(1):61-66.

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